### Scipio v1.5 output
# query file    /tmp/cGoq0a2stVKN.fasta
# target file   /genomes/genomes_ncbi/Oreochromis_niloticus_v1.2_supercontigs.fasta
# BLAT output   /tmp/lifI0C2ynmmH.psl
# timestamp     2011-04-27 11:07:02
# parameters    --show_exon=type,nucl_start,nucl_end,dna_start,dna_end,prot_start,prot_end,seqshifts,mismatchlist,translation,seq,undeterminedlist,overlap,inframe_stopcodons --exhaust_gap_size=21 --max_assemble_size=75000 --blat_score=15 --min_identity=90 --region_size=50000 --accepted_intron_penalty=1.0 --min_score=0.3 --gap_to_close=6 --min_intron_len=22 --exhaust_align_size=500 --max_mismatch=7 --max_move_exon=6 --blat_identity=81 --min_coverage=60
# Timestamp     Wed Apr 27 11:07:03 2011

--- 
Protein: 
- unmatched: 0
  matchings: 
  - overlap: 
    number: 1
    prot_start: 0
    mismatchlist: []

    nucl_end: 201
    prot_end: 67
    type: exon
    dna_start: 4484218
    translation: MNDTDMEVFGVAAPYLRKSERERIAAQNVPFDAKSAVFVPHPKQEYVKGKIRSQDGTKVNVEIEDGK
    seqshifts: []

    contig: 1
    nucl_start: 0
    undeterminedlist: []

    seq: atgaatgacacggacatggaagtatttggggtggccgccccataccttcgtaaatctgagcgggagagaattgcagctcagaatgtgccgtttgatgccaaaagtgctgtttttgtgcctcacccgaagcaagagtatgtcaaaggaaaaatcagaagccaggatggcactaaggtcaatgtggagattgaggatggaaag
    dna_end: 4484419
    inframe_stopcodons: []

  - number: 1
    type: intron
    dna_start: 4484419
    contig: 1
    nucl_start: 201
    seq: gtgaaagattccagctattatttgactatttctgacatcttatatctgtttttctgtctttatctgtcatttttttacaatgtatctttttgaaatcgtacttcag
    dna_end: 4484525
  - overlap: 
    number: 2
    prot_start: 67
    mismatchlist: []

    nucl_end: 345
    prot_end: 115
    type: exon
    dna_start: 4484525
    translation: VVTVHVDDIRPMNPPKFDKIEDMALLTHLHEPAVLFNLKERYAAWMIY
    seqshifts: []

    contig: 1
    nucl_start: 201
    undeterminedlist: []

    seq: gttgtcacagtgcatgtggacgacattcggccaatgaacccacccaagtttgacaagatagaggacatggccctgctgacgcatctgcacgaacccgccgtgctttttaacctcaaggaacgctacgctgcctggatgatttat
    dna_end: 4484669
    inframe_stopcodons: []

  - number: 2
    type: intron
    dna_start: 4484669
    contig: 1
    nucl_start: 345
    seq: gtaaggacaactgtgactcacaatatctttaactttaattcaataccaacagtctgtattctgttttttttttcttgttaattcag
    dna_end: 4484755
  - overlap: 
    number: 3
    prot_start: 115
    mismatchlist: []

    nucl_end: 502
    prot_end: 167
    type: exon
    dna_start: 4484755
    translation: TYSGLFCVTVNPYKWLPVYNPEVVAGYRGKKRQEAPPHIFSISDNAYQYMLT
    seqshifts: []

    contig: 1
    nucl_start: 345
    undeterminedlist: []

    seq: acctattctgggctcttctgtgtgactgtgaacccttacaagtggctgccggtctacaacccagaggtggtggccgggtacagaggaaagaaacgtcaggaggcccccccacacatcttctccatctctgacaatgcttaccagtacatgcttacag
    dna_end: 4484912
    inframe_stopcodons: []

  - number: 3
    type: intron
    dna_start: 4484912
    contig: 1
    nucl_start: 502
    seq: gtctgggcccatagtattgttattggcatgactagcgtcatgtttgtgtgcatttattgagttatattaacagttcaattaaaattgtgtataattttagataattaaaaggataattactttaaaaagaatgacgttctatccaatatttgcaaaacgcaaattaaatatcctaaaaaaaattcacaacaaaatgaaatgaaaaagatcaaagggacacgaagccaaaattaaataaccaaaattataggcacatatgcaaaaaagtaatactcatacagtttgagagatatacataaaaagtcttgttaacatgatttttttcttattttttaccaggtccaacatgtaattacaattttgcactgacgtaagccaaaataatttgtatttacttatttctttagttatacttttattgtgaaaaacaaatattagtcctgaggtgaaaggtggtgtaagctgtttctgtgtctgttggataaatctaattatcagaagtgcacaagttaattatattgtgagaaaaagttatttatcttgtgcacacaggataattaaatagtagagcaacttaattaacatgcttctccaacaactgcagatgaaagcagtcaccttataatagagactttattgattcagctttagtttcacttcaaacataaaatagataaacaggaatcactgacagctcaggcttcgtgttacacagtcctccatggagaccttccgcatgtgaagcaaacggtgtgtatgcggaagaacagaagaagttcttatgcttcttacgaccttctcaggtggaactacagtcctgtgctaaagtcttgagccaccccttatttctttaaatcggggtttgggaactccaggcctcaagggccggtgtcctgcaggttttagatattaccctgggtcgacatgcctgaattaaatgattagttcattaccaggcctctggagaacttcaagacatgttgaggaggtaatttagccatttgactcagctgtgttggatcaaggacacatctaaaacctgcaggacaccggccctcgaggcctggagttgcccacccctggtataactggtcagtgttcaatgccttaaaccagaggtggggaactccaggcctcgagtcctgcaggttttagatctcaccctgggtcaacacacctgaatgaaacgattagttcattaccaggcttctggagaaaacatgctgaggaagtaattaagccatttaaatcagctgtgttggatcaaggacatgtctaaaacctgcaggacctgcaaacctgatacacacaaaacaacaaacaaaaaaaagcaaccctctgaaaatggtcaggtacaaggactggactgaaaatgggtgcatccagtctacaaagactaacggtgaaagacctttagaaagctaggagaactattgcttgagacagtttaaaaaagtctggctccttggaagtaagatataaagaaatgaaggctgactggctcaagaattttgcacagaattgtatgttgcatgactcgaagcactttttatctctcactcacacattcctttcctaaatagatccacagggaacaatttattatataactaaaaccatattggttttttttttttaattagaaaaaaatatagtaaaaattatagtaaaatgaaactctatttaaagactaaaaaaagttcaaagcttaaaagcccacaaacatgcatcagcccctcaaactcagatatcatccactttctttcttctcttcag
    dna_end: 4486688
  - overlap: 
    number: 4
    prot_start: 167
    mismatchlist: []

    nucl_end: 530
    prot_end: 177
    type: exon
    dna_start: 4486688
    translation: DRENQSILIT
    seqshifts: []

    contig: 1
    nucl_start: 502
    undeterminedlist: []

    seq: atcgagagaatcagtctatcctgatcac
    dna_end: 4486716
    inframe_stopcodons: []

  - number: 4
    type: intron
    dna_start: 4486716
    contig: 1
    nucl_start: 530
    seq: gtaagtatgactttattagctgtttacatttgcgtgctgcatatatttcattcccgtcgtttgtctgatgtcacattttatcag
    dna_end: 4486800
  - overlap: 
    number: 5
    prot_start: 177
    mismatchlist: []

    nucl_end: 645
    prot_end: 215
    type: exon
    dna_start: 4486800
    translation: GESGAGKTVNTKRVIQYFATITAMGESSKKEQLGSKMQ
    seqshifts: []

    contig: 1
    nucl_start: 530
    undeterminedlist: []

    seq: tggagaatctggtgctgggaaaacagtcaacacaaagcgagtaatccagtactttgcaacaatcacagcaatgggagagtcaagcaagaaggaacaactgggcagtaaaatgcag
    dna_end: 4486915
    inframe_stopcodons: []

  - number: 5
    type: intron
    dna_start: 4486915
    contig: 1
    nucl_start: 645
    seq: gttcagtccaattaattcatcttctaattatctagaggtgaaacatgagcagaaaatttgagagcttttaccttaatttaaatgaaaagaacttgaaatgtctttttattcttctgcag
    dna_end: 4487034
  - overlap: 
    number: 6
    prot_start: 215
    mismatchlist: []

    nucl_end: 738
    prot_end: 246
    type: exon
    dna_start: 4487034
    translation: GTLEDQIIQANPLLEAFGNAKTVRNDNSSRF
    seqshifts: []

    contig: 1
    nucl_start: 645
    undeterminedlist: []

    seq: gggactctggaggatcaaatcatccaggctaaccctctgctggaagctttcggaaacgcgaagactgtgaggaatgacaactcgtctcgattt
    dna_end: 4487127
    inframe_stopcodons: []

  - number: 6
    type: intron
    dna_start: 4487127
    contig: 1
    nucl_start: 738
    seq: gtgagttaagaccagccaaggctgacatcatgctatcatattaagaaaattcaactcttataatgacaaccccccccaaatgactatatcaggtgatgtgagctttaagaataacttcagagtttgttttttttctttaaatgtagtttatttagcttagagcttgattaccagagacgtccaagaatggtcaaaaatagtgtcccagctcatatgttaaacttttccag
    dna_end: 4487357
  - overlap: 
    number: 7
    prot_start: 246
    mismatchlist: []

    nucl_end: 802
    prot_end: 267
    type: exon
    dna_start: 4487357
    translation: GKFIRIHFGTKGKLASADIET
    seqshifts: []

    contig: 1
    nucl_start: 738
    undeterminedlist: []

    seq: ggaaaattcatccgcatccacttcggaacaaaggggaagttggcatcagctgatattgaaactt
    dna_end: 4487421
    inframe_stopcodons: []

  - number: 7
    type: intron
    dna_start: 4487421
    contig: 1
    nucl_start: 802
    seq: gtaagtgcccattttaaaaattaataataatgataattaactgcagcttttctatcacaaatgttgggacagattttatacaaaagatggatgtagccacagtgaaatcaccctctggtttaaggctttggctttcactgtctccccaaagaatatgacaggtgattattcacaggcatctatgttttccacacagtgtgcccagctgtttgccaggaatgtgctggtgcagaggagaggtgataggaatgccctcctcatccaaaatcactcaacgtcacagcaaaatcagaagcacaggagacattttctaaatcaactaatgttctacctgcagtagacacctgtccaatctagctgtatacattgctcagttagaagcctaagttgattgaaaactgatgaaaaatctagtaaaattgaaatcaatcattatactaacattaaggtgttggcctgataacaatcaaatgtacaaaatgaacatcatgtagttttaaatatgacttgaaaccagtgactgacatcataagctcacattcaaggtactgaagtcataaatcaagtgatcattagactcattctccccatagacttccatataatctgactgctttgtggaagcagagaagtcgcccccctggtggtcattagaaagaacgcaggattaatgagcttccctcattgtcttcatttttcagacctagagccttttttccctcatatttggttttatgcctgaggtcagttaatgaaggtcttcttatacattttcgatcaagatctaaactttatagcagcaaaacgtctgacagagagtgaggcctgaatgtgactgtgaatatttttttcaataattaatattctgctctctcttcaagttttgtgatttgtgttttatttttggttattgtcag
    dna_end: 4488338
  - overlap: 
    number: 8
    prot_start: 267
    mismatchlist: []

    nucl_end: 901
    prot_end: 300
    type: exon
    dna_start: 4488338
    translation: YLLEKSRVTFQLLAERSYHIFYQILSNKKPDLI
    seqshifts: []

    contig: 1
    nucl_start: 802
    undeterminedlist: []

    seq: accttttggaaaaatccagagtgactttccagctgcttgcagagaggagctatcacatcttctatcagatcttgtcaaacaagaagcctgatttaatcg
    dna_end: 4488437
    inframe_stopcodons: []

  - number: 8
    type: intron
    dna_start: 4488437
    contig: 1
    nucl_start: 901
    seq: gtgaatataccaatcaatgagctctaaatggttgtgacacagtttccatggcgtctggtcctgcacagagctatgagctatttttctgtgcctcatttcag
    dna_end: 4488538
  - overlap: 
    number: 9
    prot_start: 300
    mismatchlist: []

    nucl_end: 1005
    prot_end: 335
    type: exon
    dna_start: 4488538
    translation: EMLLITSNPYDYPFISQGEITVLSINDAEELMASD
    seqshifts: []

    contig: 1
    nucl_start: 901
    undeterminedlist: []

    seq: agatgctgctgataaccagcaatccttatgattacccttttatcagccagggggaaatcactgtgctgagcatcaacgatgcagaggagctgatggcctcagat
    dna_end: 4488642
    inframe_stopcodons: []

  - number: 9
    type: intron
    dna_start: 4488642
    contig: 1
    nucl_start: 1005
    seq: gtaagtgcaaaatatgcacagaaatgtggaatacaggctgaagctatgcacttaattacagtattttttttactgatatattttgacatcagatgaaagacttgaaatacctgattgttgttggtttttaattttattaattaagttatatgtgtaaataattatgcataaatgtattactattaatttgaaaaataaattaatgcacaacatcaacatatcattacatttaaatggttaaaatcatgacattggcactaaactcagcgaagtgatcacagttcccatgtctgtgtctgttcttcag
    dna_end: 4488949
  - overlap: 
    number: 10
    prot_start: 335
    mismatchlist: []

    nucl_end: 1144
    prot_end: 381
    type: exon
    dna_start: 4488949
    translation: RAIDILGFSTEEKVGIYKLTGAVMHNGNMKFKQKQREEQAEPDGTE
    seqshifts: []

    contig: 1
    nucl_start: 1005
    undeterminedlist: []

    seq: agagccattgacatcctgggctttagcactgaggaaaaggtcggcatctacaagctgacgggtgccgtcatgcacaacgggaacatgaagttcaagcagaagcagcgggaggagcaggccgagcctgatggcaccgagg
    dna_end: 4489088
    inframe_stopcodons: []

  - number: 10
    type: intron
    dna_start: 4489088
    contig: 1
    nucl_start: 1144
    seq: gtgagacgtctgaggtggtgcttccaccctaatttaaaaccaaagcaggcgtcagcaggacaacttcacagcttcactgtgaattttgttccagcttttacttttgggccccacagctgaccaaaaataggacagcaatctctgtttaaccaggaagaaaaaaggtggttggcgagtgattgcattaaatgtttttgctgtctgggactagttgcaagtagctgcagccaccaactggtcaccaagaagtttagctacaccaccttcaaccagctttggccgccccgtatgaagcaacttgtctcagtccaactgaactgactgtggtcagtctcaaggtttgcaattaaccgccatccaattaataaacgctgattgcaaacacctaaatattcagtcagtctgtgctcatgagcacaactcatggactgtctgatgcatgtaggtgccaacttgatccccaaaactgataacagtctgactcttattgccattttattgctgtcttgacaagttgactgcacacgctcactgcagtctccaacccctgtttcctccagtgtgacggtaaccttacatttccacattatacctctgctaaatatactgaaacagatgtatatgtgacacagaggggcctgtttatgattttggtcagttcaaaatatttttagttggtgaatcatcagtttccacaaagtgtttcagaggtttatgcatttcctgctttgaaagcttcatgtaggcgtgatgtgacacttgaatttgccccctttgttcaggcctttgatgtcgggcacgtccacttatttctttcactcttataatactgcttactttgcaatgttctgctggcagcatgaggcactgccatatctccaacaaatgaacaaggctgctgtttccacccgagagtcatctgaacacagcacacaaaaagtgaatttgctgaaatagaggttattttaaaattttgcttcatttgtttcggattcctcatatttttatgattattttcagttttaatatgaaattttgctgacctgcattatccatctgtcctgtttcttaaccatttatccacgctaaggtgataagagagctacagcgagttccatctaaaatgcagggtacactctcccactgaccttcccctctgtgttatctctcctgcag
    dna_end: 4490264
  - overlap: 
    number: 11
    prot_start: 381
    mismatchlist: []

    nucl_end: 1263
    prot_end: 421
    type: exon
    dna_start: 4490264
    translation: VADKVAYLMGLNSADLLKALCCPRVKVGNEYVTKGQTPQQ
    seqshifts: []

    contig: 1
    nucl_start: 1144
    undeterminedlist: []

    seq: tggcagacaaagttgcctatctgatgggtctgaactctgctgatttgctgaaagctctgtgttgccctcgagtgaaggttgggaatgaatatgtcaccaaaggccagactccacagcag
    dna_end: 4490383
    inframe_stopcodons: []

  - number: 11
    type: intron
    dna_start: 4490383
    contig: 1
    nucl_start: 1263
    seq: gtacacgatgtttccacagctaaaaactcccactaaccacagcccatctgtgagaatccagttttctttaacctacttttaatcagtgcagacagaaagcattgtacaacctccttcaagctggagttgaaccagcaacctaacgatccctgttattacacacctacagtgcgctgtacaagctgagctatcaaagggagcacgatgtgaaaatgatgtctgattttcag
    dna_end: 4490613
  - overlap: 
    number: 12
    prot_start: 421
    mismatchlist: []

    nucl_end: 1413
    prot_end: 471
    type: exon
    dna_start: 4490613
    translation: VNNAVGALSKAVYEKLFLWMVTRINQQLDTKLPRQHFIGVLDIAGFEIFE
    seqshifts: []

    contig: 1
    nucl_start: 1263
    undeterminedlist: []

    seq: gtgaacaatgctgtgggcgccttatcgaaggccgtgtacgagaagctgttcctctggatggtcacgaggatcaaccagcagctcgacaccaagcttcccagacagcacttcattggcgtcctggatatcgcagggtttgaaatttttgag
    dna_end: 4490763
    inframe_stopcodons: []

  - number: 12
    type: intron
    dna_start: 4490763
    contig: 1
    nucl_start: 1413
    seq: gtgaacgggattcctgcagagatgaaaaaacatcaaatccctctaaaaatatctctcattgtttgatgggtgaaacgtttctgtttgatgcag
    dna_end: 4490856
  - overlap: 
    number: 13
    prot_start: 471
    mismatchlist: []

    nucl_end: 1584
    prot_end: 528
    type: exon
    dna_start: 4490856
    translation: INSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEK
    seqshifts: []

    contig: 1
    nucl_start: 1413
    undeterminedlist: []

    seq: ataaacagcctggagcagctgtgcatcaacttcaccaacgagaagctccaacagtttttcaaccaccacatgttcgtgttggagcaggaggaatacaaaaaggaagggatcgagtgggagtttattgactttggcatggacttggctgcgtgcattgagctcattgagaag
    dna_end: 4491027
    inframe_stopcodons: []

  - number: 13
    type: intron
    dna_start: 4491027
    contig: 1
    nucl_start: 1584
    seq: gtttgtttcctttttttgttaccttaaatattcaaatcaagagtagaagacaggaatgaagcactaatcaccttttccgcctctcag
    dna_end: 4491114
  - overlap: 
    number: 14
    prot_start: 528
    mismatchlist: []

    nucl_end: 1891
    prot_end: 630
    type: exon
    dna_start: 4491114
    translation: PMGIFSILEEECMFPKATDGSFKNKLYDQHLGKNSIFQKPKPSKAKTEAHFSLMHYAGTVDYNISGWLEKNKDPLNDTVVQLYQKASLKLLCQLFATYASAD
    seqshifts: []

    contig: 1
    nucl_start: 1584
    undeterminedlist: []

    seq: ccgatgggcattttctctattctggaagaggagtgtatgttcccgaaggccacagacgggtctttcaaaaacaagctgtacgaccagcacttggggaagaacagcatctttcagaagcccaaaccatccaaagcaaagacagaggcccacttctccctcatgcactacgccggcaccgtcgactacaacatcagtggctggctggaaaaaaacaaggacccgctgaacgacaccgtggtgcagctttaccagaaagcttccctcaaactgctctgccagctctttgccacatatgcatcagctgacg
    dna_end: 4491421
    inframe_stopcodons: []

  - number: 14
    type: intron
    dna_start: 4491421
    contig: 1
    nucl_start: 1891
    seq: gtatgccagctctttagacatcaaacacagattgagattagattagattaagatttcaccatttttcacaagtctttttttttttttttttttttatttttttttttattatttatatttttttaatttttttttttttatatccttttcattccatcgcctcaaaggattaatcagaggcttttaaaatgcagctgcaaataagcagacatgtctccttctnnnnnnnnnnnnnnnnnnnncagatataaaaagagggtaagctggggatacttaagtttgtttcacattgatttggatttattttagttgctgctgattttgggttttttttttttttaataattttttttttttttttttattttgggttttttttttttttttttttttag
    dna_end: 4491816
  - overlap: 
    number: 15
    prot_start: 630
    mismatchlist: []

    nucl_end: 1965
    prot_end: 655
    type: exon
    dna_start: 4491816
    translation: AAADGNKKNYKKKGSSFQTVSALFR
    seqshifts: []

    contig: 1
    nucl_start: 1891
    undeterminedlist: []

    seq: ctgctgctgatgggaacaagaaaaactataagaaaaaagggtcctccttccagacagtttctgcactctttagg
    dna_end: 4491890
    inframe_stopcodons: []

  - number: 15
    type: intron
    dna_start: 4491890
    contig: 1
    nucl_start: 1965
    seq: gtaagacatagagttattatttacctgtaaatctttttaagttttttaaaataaacttacatgacacagtttttctgtattaagaactggagcagtagtagttgtagtagtttcttctctgtctatcaaaaattgataaaaataaaacaactggttgatatttgtgacgagggactacaagcttaaaagcttgtcttgtcttctctacattccctcaataaattatttgtttttgttgttttgcataaatttataaaaatgtaacatttaaggacacgtagaagactcgccagataatagaatttcaagtcattcctcctccttcttttttcggctgctccctttcgaggtcactacagcaagtcatctctgttcacctcaccctatcccagcatcctcctcctccacaccaaccctctgcatgtcctccttaactacatccatgaatcttctctgtggtcttcctcttccggcagctccatcatcaacatcccttctccaacatatccactgatcttctcatcctgtccatcctgctcattcccagtcaggatctgaatatcttcggctccacctcccgtatttttgtcagtgccaccgtctctaaatcattcatcacagaaggtctcaccaccatcttttaaacctttcttttaactcttgctgctcacacaaatcacccctgacactcgtttccacccccccgtcctctcttccttacctgttttgtgcactctccagtgctttgactcttctttcactgcatctgcacctttccacctgcctccctctcattcagacacatgtattttatcttttttctactgactctgattcctcttcttcccagagtttacctccacctcaccaggctctcttccacttgcttcacactctcactacagatcacagtggtctaaagtttcctgaattccgagacaattaactgctcatgtttgaaccagaaaacagattatagcacaaaaatagacagcttcttggctttcttttttcctatttttttttctttttttcgacgagccattctgacatgggacctcagtttgtccaattaattattatttttttttttttgataaactaggggtccaagaaattaataaaacagttcctcgtgataatatgtatttgagaacttgcctctgagttttgctcctgtgtgaaagaaatatctgctttaatgcgtaaccttagctactatctatttatgttgaaattaattgagtgaattaaacacaacacaaagaatttttggaatttctttttatcagacattaaaataaaaagatgaaacatcttatttagtgccattcagagatgctggtctaagccagagtagctggctccatttttggagtgtagataaacttgcaacctccattaataacattaataatatgtcttgatgtgtggcttattatactaataacccatcccgggaactctgtgatccagattcagtgactttaagggatttctcactgaagagcatctgcgtctctgcattgcgctcacacagtttatcttatacttgagcgctccatcgtgtgatctaaaaatgggcattttagtgtcaatgcgacagtcaaagctcgagaataacgagtccaaaaaccagcgggtaacattactgttaatatgattcctgtggtatgggtgttataatgttatcatcagtccatctgactgaaagtatgatgtgttgcag
    dna_end: 4493619
  - overlap: 
    number: 16
    prot_start: 655
    mismatchlist: []

    nucl_end: 2053
    prot_end: 684
    type: exon
    dna_start: 4493619
    translation: ENLNKLMANLRSTHPHFVRCIIPNETKIP
    seqshifts: []

    contig: 1
    nucl_start: 1965
    undeterminedlist: []

    seq: gagaacctgaacaaactaatggccaacctcaggtcaacacatccacactttgtcagatgcatcatcccaaatgagaccaagataccag
    dna_end: 4493707
    inframe_stopcodons: []

  - number: 16
    type: intron
    dna_start: 4493707
    contig: 1
    nucl_start: 2053
    seq: gtaaaacaaacaggagcagaaattgaaggaaggagctgaaaactgaagttaccctgtggggaaaacttacctttatctgttgtag
    dna_end: 4493792
  - overlap: 
    number: 17
    prot_start: 684
    mismatchlist: []

    nucl_end: 2171
    prot_end: 724
    type: exon
    dna_start: 4493792
    translation: GIMDHHLVLHQLRCNGVLEGIRICRKGFPSRILYGDFRQR
    seqshifts: []

    contig: 1
    nucl_start: 2053
    undeterminedlist: []

    seq: gaatcatggatcaccatctggtccttcatcagctgcgatgtaacggagtgctggaaggtatccggatctgcaggaagggtttccccagcaggattctgtatggagatttcaggcaaag
    dna_end: 4493910
    inframe_stopcodons: []

  - number: 17
    type: intron
    dna_start: 4493910
    contig: 1
    nucl_start: 2171
    seq: gtaacatgtaacttgtttgaagaactgcctggagtttgagactaaacctccacacgtgtgtgacag
    dna_end: 4493976
  - overlap: 
    number: 18
    prot_start: 724
    mismatchlist: []

    nucl_end: 2295
    prot_end: 765
    type: exon
    dna_start: 4493976
    translation: YRILNASVIPEGQFIDSKKASEKLLSSIDVDHTQYRFGYTK
    seqshifts: []

    contig: 1
    nucl_start: 2171
    undeterminedlist: []

    seq: atacaggattctgaatgccagcgtgatccccgaggggcagtttattgacagcaagaaagcctccgagaagctgctgtcgtccatcgacgtggaccacacccagtataggttcggatacacaaag
    dna_end: 4494100
    inframe_stopcodons: []

  - number: 18
    type: intron
    dna_start: 4494100
    contig: 1
    nucl_start: 2295
    seq: gtatgtttaaaaagatatattttatataatatttcagctgaaataatttgaaattgctagcaggcagcacaatggtatggtggttacaactgatgccccacagaaggtcctgagttcaattccaccatcaggccgggctttctgtgtttgcgtgggttctctccgggtaatccggcttcctcccacattccaaagacatgcagttagtggggttaggttaactggaaactctaaattgcccataggtgcgaatggttgtctgtctctgtgtgttagccctgtgacagactggcagcctgtccagggtgtaccctgcctctcgctctaagacagctgggtgggctccagcccccacatcatcctgacaaggataagcagaagagaatggatggataatttgaaattgaagagaaatttgacttctctttgtcaacttgcag
    dna_end: 4494540
  - overlap: 
    number: 19
    prot_start: 765
    mismatchlist: []

    nucl_end: 2432
    prot_end: 811
    type: exon
    dna_start: 4494540
    translation: VFFKAGLLGLLEEMRDERLAVLMTRIQAVARGYVTRLRLKEMMKKR
    seqshifts: []

    contig: 1
    nucl_start: 2295
    undeterminedlist: []

    seq: gtgtttttcaaagccggccttttgggtcttctggaggagatgcgggatgagcgtctagctgtgctgatgactcgaatccaggctgtagccaggggttacgtcaccaggctgaggttaaaggagatgatgaagaaaag
    dna_end: 4494677
    inframe_stopcodons: []

  - number: 19
    type: intron
    dna_start: 4494677
    contig: 1
    nucl_start: 2432
    seq: gtctggcacatttcttttttcttttggattagtggatgtaaaatttgtggaaaatcaggcgaatgaaagacagagaaatgggattgaacacatgcaatttcataactgcatcctttatggtaacgaaagagactatttcttctaaactgtcattaattatgattgtaattgcagtggtggtctttgtctcacattaaaaatgcaaagatgatttctaattttctactctctaaatgctttccttcattttttaagctactctgacattgtagctagtgaaaaagtcaggaataacttagataaaccttaaaaagatcagaagattttctcatcaccttcacatctgtaacaaattcttcattgttgtgatttttcactctgtag
    dna_end: 4495061
  - overlap: 
    number: 20
    prot_start: 811
    mismatchlist: []

    nucl_end: 2688
    prot_end: 896
    type: exon
    dna_start: 4495061
    translation: EAVYIIQYNIRSFMNVKNWPWMKLFFKIKPLLRSAEAEKEMQTMKEEFARLREELAKSEARRKELEEKMVMLMQEKNDLYLQIQA
    seqshifts: []

    contig: 1
    nucl_start: 2432
    undeterminedlist: []

    seq: agaggccgtttacatcatccagtacaacattcgttcattcatgaatgtgaagaactggccttggatgaagctcttcttcaagataaagcctctattacgaagtgcggaggctgagaaggagatgcagaccatgaaggaggagtttgctcgactcagagaggagttggcaaagtcggaggccaggaggaaggagctggaggagaagatggtcatgctcatgcaggagaagaatgacctttaccttcaaatacaagca
    dna_end: 4495317
    inframe_stopcodons: []

  - number: 20
    type: intron
    dna_start: 4495317
    contig: 1
    nucl_start: 2688
    seq: gtatgtaaacactcagccctgagtgggacaaagtggtctgcttgtattgattttgttctgcctgatttaaagatcagattaaattaaaagatgatcaataatgaggtaagataagaactagtgtaattgatcactgcagggaaactggaggaaaagaaagttaaaataagaagaaagcagaccaaccatgatgtaaacttaaagcaaatagtgcttataacagcgttacgacatattaagatttgaggtttctggtgttggtgcacagaaaaagccctgtgctactactgtggtaatctctattactgcaagaacaagtgaagtaaagaaaatgctgatctatcttttattcagacatgaaggtcactcagtacacgatttatttaagtactgtgagttcacctacgcaggctgtgatgctcgaggaaatgaagagcacagtttctctctgctgtgctgaataaggtcattagaatcaccatcctctgaaattagagctcatgtcagcgcttcctagagttcgagcagctgttgaaggaagcgtgaatgtttcctccatgctgttaagaaaccactaacggaagaaaacaagtcatgtcaagctccgctgacatgacgacagacacaggaaatagcttgtagtattccatttaaaagttttctttatagagaaagggaaatggcaggcttctgcaccatcagcaggcagctcagccatccttaaaggaaaatagaagattgcaaacaaatccctgtgcaaagacatgaaataagaatatgtgtccaaactttagaaaaagaataactatcacctgaggttaaattaaaaatttactccactataacagtcattgtgtcctggttcctcag
    dna_end: 4496187
  - overlap: 
    number: 21
    prot_start: 896
    mismatchlist: []

    nucl_end: 2931
    prot_end: 977
    type: exon
    dna_start: 4496187
    translation: ERENLCDAEERCEGLIKSKIHLEAKAKEFSERMEEEEEINAEITAKKRKLEDECSELKRDIDDLELTIAKVEKEKYATENK
    seqshifts: []

    contig: 1
    nucl_start: 2688
    undeterminedlist: []

    seq: gagagggagaacctgtgcgatgctgaggaaaggtgtgaaggcttgataaagagcaagatccacctggaggccaaagccaaagagttctccgagaggatggaggaggaggaggagatcaacgctgaaatcaccgccaagaagaggaagctggaggacgaatgttctgagctcaaacgggacatagacgacctggaacttaccatcgccaaagtggagaaggagaaatatgccaccgaaaataag
    dna_end: 4496430
    inframe_stopcodons: []

  - number: 21
    type: intron
    dna_start: 4496430
    contig: 1
    nucl_start: 2931
    seq: gtgcctgtgattatttctgttgtatgaacttttaaagctttttgtttttaacaaacttgcaaataaaggtttctctccttag
    dna_end: 4496512
  - overlap: 
    number: 22
    prot_start: 977
    mismatchlist: []

    nucl_end: 3108
    prot_end: 1036
    type: exon
    dna_start: 4496512
    translation: VKNLIEELTTLEENLLKSSKEMKALQEVHQQTLDDLQAEEDRVNSLIKTKTKLEQQIDD
    seqshifts: []

    contig: 1
    nucl_start: 2931
    undeterminedlist: []

    seq: gttaagaatttgatcgaggagttgacgactcttgaggaaaacctgttgaagtcctcaaaggagatgaaagctttgcaggaggtgcaccagcagactttagacgacctccaggcagaggaggacagagtcaattctctaataaagacaaagactaagttggagcaacaaattgatgat
    dna_end: 4496689
    inframe_stopcodons: []

  - number: 22
    type: intron
    dna_start: 4496689
    contig: 1
    nucl_start: 3108
    seq: gtaagtataaaagggctcagtgcttcttaagctgaagccagcacgtaaacttgtaatgttagctgcagacttagtgattgatgtaaacatctcctgcag
    dna_end: 4496788
  - overlap: 
    number: 23
    prot_start: 1036
    mismatchlist: []

    nucl_end: 3254
    prot_end: 1085
    type: exon
    dna_start: 4496788
    translation: LEGLVEQEKKLRADLERSRRKLEGDLKLNQETIMDLENERQQAEEQLKK
    seqshifts: []

    contig: 1
    nucl_start: 3108
    undeterminedlist: []

    seq: ctggaggggctggtggagcaggagaagaagttgcgtgctgacttggagagatccagaaggaaactggagggagatctgaagctgaaccaggaaaccatcatggacctggagaatgaaaggcagcaggcggaggaacaactgaaaaa
    dna_end: 4496934
    inframe_stopcodons: []

  - number: 23
    type: intron
    dna_start: 4496934
    contig: 1
    nucl_start: 3254
    seq: gtgagttaataaatagatttcctttagtattctttctccaagcaatgaatccgagcttttacccttaaactcaagaacaatctgttcagcagtgcacgcccagacaaaagctttttattcctttttatctaaagctgtccttttgctgttttacctcctaaaccacagagtgaatccacatccaactatccctgtttcctatttgaaatgtcagctaatcgtaccaccttgttgtattgagcccacacagcaggtagcaaagcagcagacataataatgaacaaaaggtgcttttcaatacaagcaggaagagtttaaaaggacaaaaatccagacaatcgacaagatcacagaatcatcacagaggcacaaagtgaaggaaaacacacacaggtggaaacaacaggactttatggcaacacaacaaggtttaaatactaataaaataatttttaaaaaactaataacaatactctttaaattttcattaaattacattaatatttagcgccatcccacacttatcaaggttttgaaaaaacaacatggcaatgatggctccatccatcttttatatacagtctgtggtttagtgaaactttgatgttataaacggagttaaatatcatctgaacctgaaatcattctcttctcag
    dna_end: 4497590
  - overlap: 
    number: 24
    prot_start: 1085
    mismatchlist: []

    nucl_end: 3345
    prot_end: 1115
    type: exon
    dna_start: 4497590
    translation: KDFEISSLQSKIDDEQALSTQLQKKIKELQ
    seqshifts: []

    contig: 1
    nucl_start: 3254
    undeterminedlist: []

    seq: gaaggactttgaaatcagcagcctgcagagcaaaattgatgatgaacaagctcttagcactcagcttcaaaagaagattaaagagcttcag
    dna_end: 4497681
    inframe_stopcodons: []

  - number: 24
    type: intron
    dna_start: 4497681
    contig: 1
    nucl_start: 3345
    seq: gtgtttatgtaattgtagagtctcaaagtatcgagcacttgatgttcagtgttataataccagtttcgtgtgttcacattgtag
    dna_end: 4497765
  - overlap: 
    number: 25
    prot_start: 1115
    mismatchlist: []

    nucl_end: 3735
    prot_end: 1245
    type: exon
    dna_start: 4497765
    translation: ARTEELEEEIEAERAARAKVEKQRSDLSRELEEITERLEEAGGASAAQAELNKKREAEIQRLRHELEESTLQHESIAVALRKKQADSVAELGDQIENLQRVKQKLEKEKSEMKMEIDDMARSMETVLKSK
    seqshifts: []

    contig: 1
    nucl_start: 3345
    undeterminedlist: []

    seq: gctcgcactgaagaattggaggaggaaatcgaagctgagcgtgcagctcgggccaaagtggagaagcagaggtctgacctgtccagagagctggaggagatcactgagaggctggaggaggccggaggagcctccgccgctcaggccgagctcaacaagaagcgcgaggccgagattcagaggctgcgccacgagctggaagagtccaccctgcagcatgaatccatcgccgtggctttacgcaagaagcaggcggacagcgtcgcagagctcggtgatcagatagaaaaccttcaaagggtgaagcagaaactggagaaagaaaagagcgagatgaagatggaaatcgatgacatggcaaggagtatggagactgttctgaaaagcaag
    dna_end: 4498155
    inframe_stopcodons: []

  - number: 25
    type: intron
    dna_start: 4498155
    contig: 1
    nucl_start: 3735
    seq: gtaaacatctgtctgcagaggggactttgttctaaaatcttctcttctattataaccagagttccatatttcag
    dna_end: 4498229
  - overlap: 
    number: 26
    prot_start: 1245
    mismatchlist: []

    nucl_end: 3862
    prot_end: 1287
    type: exon
    dna_start: 4498229
    translation: ANVEKQCRSLEDQMNEYKTKADEAQRSLSDYTTLSARLQTEN
    seqshifts: []

    contig: 1
    nucl_start: 3735
    undeterminedlist: []

    seq: gctaacgtggagaaacagtgcaggagccttgaagatcaaatgaatgaatacaagaccaaagcagatgaagcccagaggtctcttagtgattacactaccctgagtgctcgactgcagacagaaaatg
    dna_end: 4498356
    inframe_stopcodons: []

  - number: 26
    type: intron
    dna_start: 4498356
    contig: 1
    nucl_start: 3862
    seq: gtaggtgtttaattaaaaaaggataaaaagaaacattttagatgctcagatacgtgagtttttattctttttgtcctggacag
    dna_end: 4498439
  - overlap: 
    number: 27
    prot_start: 1287
    mismatchlist: []

    nucl_end: 3981
    prot_end: 1327
    type: exon
    dna_start: 4498439
    translation: GELTRLLEEKESILSQVNRGKTAAGHKIEEMKRLLDEEIK
    seqshifts: []

    contig: 1
    nucl_start: 3862
    undeterminedlist: []

    seq: gtgaacttacccgtctgctggaagaaaaagagtccattctgtcccaggtgaacagagggaagactgcagccggtcacaaaatcgaagagatgaagagacttttggatgaagaaatcaag
    dna_end: 4498558
    inframe_stopcodons: []

  - number: 27
    type: intron
    dna_start: 4498558
    contig: 1
    nucl_start: 3981
    seq: gtctgaaaggcacaacaaagattgatatcaagtcacagcaatgatttagagttcttactaatctcttgtgaacggatatgagaaattcaatctcaaaacatcagctatgacgatttagctgtttattagcttcttttttcatatctacctgcattaggaaacaatgactgactgaactggatgttttagccacagatatcaaagattttaggaatcttttagttcattagagccaaaccatgtgaccgtaaataaacgtggctctgatactaagtttgatgcatgcagactaattttgcagtccatgattgcaatacctcgactgactctttccaagacaggtcagtaatttattcgacagacatttattgctgtcttatcatctctgtgtacaatatgtaaagctatgataacatatttgtcaaacatgtaaaagccagaagaaaaaaattgtaattggaaattacaaatttacaaataagtttattaatatattctgaatgtgtaaagaaggtgcatttttacatttagcccaaagggggcagcattcagtatattctgaatgataagaaatagccatgattgatcggaatgatttttaatgaccagcagggggcgactcctcatggcaggaaaaaatatttatttagataacaaactccttctcagtgaatccttccataattgttgttttaaacaaacaactttcatttcaaacaaatatttgtaacttttgtcactagactgcttcattagtctgcaccacttcttcaaaaaagcaacaagttaaacagaatgtgaacattgccaaacatggaaaaataaagttcagtcttagtcttataaaaaaaagaaatccagaaacttgtgaacagagatgaaaaatatataatttagcgagagtttaacactattcactcttattggctgcagtgagcttgtttttgactgcagagctgtggtggggcgtggtctggggcgtggctgcgggggaggagggcgcacctgagcagcatctgcaatctcgcctcgccggcttaaaacagaatgaactaggtcctgttgttgttgtgtgtaggctgtagctgaaaagaagtgtactgaaaagtacgaacatgtggttcggtctctcgtgccccaatcgtgggtttcggcaccactgtaaacgatgcacgacagacccgaccacatgttcacacttttcagtacactgtcgacttacccacgcgcctgcagcttttcagcgcatgcgcatattattaacacaactgctgctaatttctttgttccgccgtaaaagtgattcggatgttaaacattacttccgtataacttgcaccccacctgtcagaactctgcaccccaccagtggggtgcgccacacactttgagaagcactggtttagaggaaaatctagcagctgttttgtcactttattgtgtccccaactttgtgagatctttgtgagtgacttcataattggatctgagaaacaacagaatctgaagtcagcttgataaagcttcacagccagtttcctctcctcccttagttgtttctgtcttgcctgtttctcacagctgctttctgagagaaacctttaaaaagtatctataccgcacctgctcaggatgaaaaatagagccatgttagaatttagctggtgaacatttagcagagtcgggagaccaaaatcagacttcaaaggaattcaaatgttgctccataaatattaaatgtaaaagttgcctgcagtcatgactcagtgtgattcacagctgtagtcacagcttgttccttctgttcccagagggcaaataaatttgttactgcatctcggtgaagcagtttttttgtgtatgttttgaaatttctttag
    dna_end: 4500438
  - overlap: 
    number: 28
    prot_start: 1327
    mismatchlist: []

    nucl_end: 4178
    prot_end: 1393
    type: exon
    dna_start: 4500438
    translation: TKNALAHSLQSSRHDCELLREQYEEEQEAKAELQRCLSKVNSDVAQWRNKYETDTIQRTEELEEAK
    seqshifts: []

    contig: 1
    nucl_start: 3981
    undeterminedlist: []

    seq: acaaaaaacgccttggctcacagtttgcagtcatctcgtcacgactgcgagctcttaagagagcagtacgaggaggagcaagaggccaaagctgagctgcagcgctgcctgtccaaggtgaacagtgacgtggctcagtggagaaataaatacgagacagacaccatccagcgcaccgaggagctcgaggaggcaaa
    dna_end: 4500635
    inframe_stopcodons: []

  - number: 28
    type: intron
    dna_start: 4500635
    contig: 1
    nucl_start: 4178
    seq: gtaaaaaacctcacagtgtgtttctcgggtcagcgctgatgggcttcttctgctttaatgcagtttatgttcggttcaaag
    dna_end: 4500716
  - overlap: 
    number: 29
    prot_start: 1393
    mismatchlist: []

    nucl_end: 4362
    prot_end: 1454
    type: exon
    dna_start: 4500716
    translation: KKLVQRLQESEEMTEAANVKCASLEKTKQRLQAEVEDLMVELERSNAANATLDKKQKNFDK
    seqshifts: []

    contig: 1
    nucl_start: 4178
    undeterminedlist: []

    seq: gaagaagctggtccagcggctgcaggagtccgaggagatgacagaggcagcaaatgtcaagtgtgcatcgctggagaagaccaagcagaggctgcaggcggaggtcgaggatctcatggttgagctagaaaggtcaaacgcagcaaatgccaccttagacaagaaacagaagaatttcgacaag
    dna_end: 4500900
    inframe_stopcodons: []

  - number: 29
    type: intron
    dna_start: 4500900
    contig: 1
    nucl_start: 4362
    seq: gtgggtctttctgttttgaaacatgtcctcatttgtatcatcataaggctacactgattacatgtgctgcttcctgccag
    dna_end: 4500980
  - overlap: 
    number: 30
    prot_start: 1454
    mismatchlist: []

    nucl_end: 4528
    prot_end: 1509
    type: exon
    dna_start: 4500980
    translation: VLAEWKQKYEECQSDLEVSQRESRALNTELFKLKNSYEEVLDHLESMKRDNKNLQ
    seqshifts: []

    contig: 1
    nucl_start: 4362
    undeterminedlist: []

    seq: gttttggctgaatggaagcagaagtatgaggagtgtcaatcagatctggaagtctcccagagagagtccagagcgctgaacacagaactcttcaagctgaaaaattcatacgaagaagtcctggatcaccttgagagcatgaaaagagacaataaaaatcttcaac
    dna_end: 4501146
    inframe_stopcodons: []

  - number: 30
    type: intron
    dna_start: 4501146
    contig: 1
    nucl_start: 4528
    seq: gtaagccttcggcaggaaataaacttctgtttgggttctgagaggcagcagtcaatgttttacataaagtgtgttgatgtgttttttag
    dna_end: 4501235
  - overlap: 
    number: 31
    prot_start: 1509
    mismatchlist: []

    nucl_end: 4653
    prot_end: 1551
    type: exon
    dna_start: 4501235
    translation: QEITDINEQVGESTKMLRELEKATKHAEQEKRDTQAALEEAE
    seqshifts: []

    contig: 1
    nucl_start: 4528
    undeterminedlist: []

    seq: aggaaatcacagatatcaacgagcaagttggagagtccacaaaaatgctccgcgagctggaaaaagccacaaagcacgccgaacaagagaagagagacacccaggcagctcttgaggaagctgag
    dna_end: 4501360
    inframe_stopcodons: []

  - number: 31
    type: intron
    dna_start: 4501360
    contig: 1
    nucl_start: 4653
    seq: gtttgtttcacctccacaaactttaacattttacaaaataacaacaacattaactgctgttttctctctgaag
    dna_end: 4501433
  - overlap: 
    number: 32
    prot_start: 1551
    mismatchlist: []

    nucl_end: 4962
    prot_end: 1654
    type: exon
    dna_start: 4501433
    translation: SSLEQEESKILQLELELNQIKSEVERKVAEKDEEIDQLKRNYQRTVDYLQSTLDAETRSRNDAVRMKKKMEGDLNEMEIQLGHANRQAAEATKQLRNLQTQLK
    seqshifts: []

    contig: 1
    nucl_start: 4653
    undeterminedlist: []

    seq: tcttccttggaacaagaggagtccaaaatcctgcaacttgagctggagctgaatcagatcaagtcggaggtggagaggaaggtggcagagaaagacgaagaaatcgaccagcttaaaaggaattaccagagaacagtggactatctgcagagcacgctggatgcagagacgcgcagcaggaacgacgctgtccggatgaagaaaaagatggaaggggatctaaacgagatggaaatccagctgggtcacgccaaccggcaggcagccgaggcaaccaaacaactgagaaacctgcagactcagctgaag
    dna_end: 4501742
    inframe_stopcodons: []

  - number: 32
    type: intron
    dna_start: 4501742
    contig: 1
    nucl_start: 4962
    seq: gtgcgtgggaactttttctgttctggttaaaaattctgggatgatgtttaaaatccccaaactactgcctccatcctcag
    dna_end: 4501822
  - overlap: 
    number: 33
    prot_start: 1654
    mismatchlist: []

    nucl_end: 5166
    prot_end: 1722
    type: exon
    dna_start: 4501822
    translation: DTQVHLDEALQRQEDLKEELAIIERRNNLMMAENEELRASLEQSDRSRKLAEQELMEVSERVQLLHSQ
    seqshifts: []

    contig: 1
    nucl_start: 4962
    undeterminedlist: []

    seq: gacacccaggtccatctggatgaagccctccaacgtcaggaggacctaaaagaggagctagctatcatagaacgccgcaacaatctaatgatggcggagaacgaggagctgagggcgtcactggagcagtctgacagaagtcgaaagcttgctgagcaggagctgatggaagtcagcgagcgtgttcagctgctgcactctcag
    dna_end: 4502026
    inframe_stopcodons: []

  - number: 33
    type: intron
    dna_start: 4502026
    contig: 1
    nucl_start: 5166
    seq: gtgagaggccaaaatacagagtccattttttttagtgtatgtgcagcttctgaatattgtgtggttggttttcacatctgagaaggccctcagatgataagataatgacaaaatacatggctctttatttatgaaaccttaagtcaagatcatttgtgggattttcagagagcttaatcaggaatacaatcatcagatttatccatagtaaaaataatatttagttgcaatctttctgtatataaaatagtagaaaatcagctctatttgaatcaactgagcaataaaacctgcttttatatcagtgctgtgtaatagacacaagaaacctcagcagtttgatttaggaaatcatggatcgaactgccgcctctgtgttttacagatgatttgagctatttcaagcttttctctctttaattttgacactttcactgatttaagggacccaaagacttctttcaatgtcatatttcaatgttgtttaatgaccag
    dna_end: 4502521
  - overlap: 
    number: 34
    prot_start: 1722
    mismatchlist: []

    nucl_end: 5292
    prot_end: 1764
    type: exon
    dna_start: 4502521
    translation: NTSLVNSKKKMEADLTQLQSEMEETMQEARNADEKAKKAITD
    seqshifts: []

    contig: 1
    nucl_start: 5166
    undeterminedlist: []

    seq: aacaccagtctcgtgaactctaagaagaaaatggaggctgatttgactcagctgcagtcagagatggaggagaccatgcaggaggcgaggaatgcagacgagaaggccaagaaagccatcacggat
    dna_end: 4502647
    inframe_stopcodons: []

  - number: 34
    type: intron
    dna_start: 4502647
    contig: 1
    nucl_start: 5292
    seq: gtgagtctcctcctcaaatcaattaactgcgctgtcatttgaatgtgggctgctggactttgaggctggattaaaatgtcacagttcacatttgcatgcag
    dna_end: 4502748
  - overlap: 
    number: 35
    prot_start: 1764
    mismatchlist: []

    nucl_end: 5463
    prot_end: 1821
    type: exon
    dna_start: 4502748
    translation: AAMMAEELKKEQDTSAHLERMKKNLEATVKDLQQRLDEAEQVALKGGKKEIQKLEAK
    seqshifts: []

    contig: 1
    nucl_start: 5292
    undeterminedlist: []

    seq: gctgccatgatggctgaggagctgaagaaggagcaggacaccagcgctcacttggagaggatgaaaaagaacctggaggccacggtgaaagacctgcagcagcgtctggatgaggccgagcaggtggcgcttaaaggaggaaagaaggagattcagaagctggaagccaaa
    dna_end: 4502919
    inframe_stopcodons: []

  - number: 35
    type: intron
    dna_start: 4502919
    contig: 1
    nucl_start: 5463
    seq: gtacgatctgacagagagcagggacatgctgcagagaaattaaggcacaaatctaaactaaatctatttctattaag
    dna_end: 4502996
  - overlap: 
    number: 36
    prot_start: 1821
    mismatchlist: []

    nucl_end: 5568
    prot_end: 1856
    type: exon
    dna_start: 4502996
    translation: VRELENELEAEQKRSGEAVKGVRKYERKIKELTYQ
    seqshifts: []

    contig: 1
    nucl_start: 5463
    undeterminedlist: []

    seq: gtccgtgagctggaaaatgagttggaggcagaacagaaacgcagtggagaggccgtgaaaggtgtgaggaaatatgaaaggaagattaaagagctcacttatcag
    dna_end: 4503101
    inframe_stopcodons: []

  - number: 36
    type: intron
    dna_start: 4503101
    contig: 1
    nucl_start: 5568
    seq: gtaacaagtctgttacgtaacaaagcaaatttcacaagctgctcagagaaggagagaaaatgttcaaagagatgtgagagaagcacttctgtttgatttcag
    dna_end: 4503203
  - overlap: 
    number: 37
    prot_start: 1856
    mismatchlist: []

    nucl_end: 5664
    prot_end: 1888
    type: exon
    dna_start: 4503203
    translation: GEEEKKNSARLQDLVNKLQLKVKAYKRQFEEA
    seqshifts: []

    contig: 1
    nucl_start: 5568
    undeterminedlist: []

    seq: ggtgaggaggagaagaagaactcggcgaggctgcaggatctggtcaacaagctgcagctcaaagtgaaagcatataagcggcagtttgaggaggcg
    dna_end: 4503299
    inframe_stopcodons: []

  - number: 37
    type: intron
    dna_start: 4503299
    contig: 1
    nucl_start: 5664
    seq: gtgagagaaaatccttaaagactgtgagaaatgcaggcgtgttatgtagacaaaatactcttctttactgtggctctctgaaacacag
    dna_end: 4503387
  - overlap: 
    number: 38
    prot_start: 1888
    mismatchlist: []

    nucl_end: 5814
    prot_end: 1938
    type: exon
    dna_start: 4503387
    translation: EEQSSIHLAKFRKVQHELEEAEERADVAESQLNKLRARSRDVAGKGELKS
    seqshifts: []

    contig: 1
    nucl_start: 5664
    undeterminedlist: []

    seq: gaggaacaaagcagcatccatttggctaagtttcgcaaagtgcaacatgaactggaggaggcagaggagcgagctgatgtggcagagtcccagctgaataaattaagagcgaggagtcgtgacgttgccggtaaaggggaattgaagtct
    dna_end: 4503537
    inframe_stopcodons: []

  number: 1
  prot_start: 0
  stopcodon: tag
  downstream: taggaaatagaaatcatcacaacttcaaaaagtccctgaacaaatggttgttttcagctttgtgacagtgcattgttgcattttttattactttgaagtgtttttattgggattaagaatcaacttttacatttatctgaacaaaaaaaagaacaaattagttctgctaaatcttatgatacaaataagctgaagtcaaaaagtcaattttccacaggaaagtttgtagctgagtgaagtgacctgaaagtatgtgtgtgggagcaataatatgagctggaacagttctccagtgctttgaaagaggatacactggaccacttattatgaaaggaaaggtggtaaagcgtcccatcccattagacatgcttacaaaatgtgttttccatttcatgccataacctgttgatgtgttttgaaccttcgctgacagactgataaacccgctgacggttatgctgctgtgatcaaatcagcttcttatgaagttgtctcgtgttatttaaaaataaagattatgagacattaagtttctgttagtgctgtctgctgctgtttttaaaatcataatgacttaatttgagctcagtcattgaaggccttaatgaaggcaggagtcacactggatcgtctttccagcaggagcagaaaataaaaaatgaacagaacaaacacttcagttcagtttacaaacttgtttattcttttttatttattacaaataaattacaatcttggtaatttagtaatatttatcactggtggttctctcttttatgatctgcacgtcataacaccgagcacatggtatctgaaatgagctctttatggtctatcgtcaggatgctgtagtttgagcacagcaaacacacgtctcgacatctgtcgtggcattaaagctcttctcttggttctcgtttccccgagtcctcatgaagtgctttcatgcggcggttagggaaggaaatacaccgttaggtccataagtatttggacaatgacagatttaaaaatttcttttaccacaacagtgtaccttaaatctatggagcccctctgatgacatggtccaaaaaaataaataaattgtggccacaaaatactacttcgtgggcacgaaatgggtataacgtgcccacgaaatacttatttgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtctctgtccatggtgtataggtttagcctactcttatgcttatgtctctacgcagctgtccaggaattgtatcaatatgatgtgcgcacgttatctattttgttgccagaaatgcgtaattcgttgccacgttatacccaattcgtgcccacaaattagcatttcgtgcgcacgttatacctatttcgtgccctcgaaatagtgttttgtggccacaaataagtatttcgagggcacgaagtagtattttgtggccactatttatttattttttggtccgtgtcatcagaggggctccgtataaatcaaataataagtgcagtgtttcagtgagatgacactaaattaattagacaaactaagataatattaaaccaggatttttaatactgaaaattgtttagttgtcttctgcactctctcaggccacttggtgtacctgaactggacagtgcattcctggatgtggactgtttgagtgaacagttactaactgcaaattcaacccttggaatcaactctgtatttttgtttgtttgttttaaatctgctttatctggccaagaaatggctaataattttttacaaatggttgtaatttcaaaacaattaatgcaacacttctggtgaattgcgttaaagtggaagatcttcaatcagatctcactctaatatctgcagtacagtgtcacttcctgttcctgttataaagcacggtggtgttttgtgtagctcaggggtgtccaactccaggcctcgagtgccggtgtcctgcaggttttagatgtgtccttgatccaacacagctgatttaaatggctaaattacctcctcagcatgtcttgaaagctgtgtcccaaaacataggctgcatcctttggaggacccggccttcgcggtcttcgtgggcccggtccttcaaaggccgagaaggccggaagtgcgaggctgtgaaatgggacagtctagccttcagatttgcgtcaccgctgtctcggtggagtttaataaactcagctgtctgctccttgctatttaaaatataacaggacactggcgtaaattctcaaccgtctcacacttctgattaatcagttttctgtttgacgtttattcagctgtgtgaaaatcccgaaggaatcaacccgatggattaataaagttttatttagtctaatctaatctaataactttgatctcagccaaaccgatttactccggctcgagtgaccattgaaccccccggctagctatcgagcgggtgggtaacagacgtctccgaaaacgtcagagcacttttgcaaatatgcgatgtcttgataaaccgagcagatatttaaagtttacacagctactttctcgcctgaaaatatgtttaaagtttattttgtgacccagaaagattaataagagtaatattaaaaaacttagtagcggccgccattgttggaaactggaattggctgggccgcgctatgaattctgggatatggtgggccacgaaggacacacccgacccatccttcaaattcggggaaatgaaggacgcatttgtcggccgcatttgaaggagtcgacgagttgggacagccttcgtcgcctggctgtgatgtaatcggccttcaaatgcggcctccgaaggatgcagcctacgttttgggacacagccaaagttctccagaggcctggtaatgaactaatcgtttgattcaggtgtgttgacccagggtgacatctaaaaccttcagggaaccggcccttgaggcctggagttggacacccctggtgtagcttatctgtgtagcccatttaaattaaacttttagataacgacttatttaaaagtgtaatattcacgttttatccaaagcacactccctgctgaatcacctactaattatattcacagtcttcactcactgtgtctagagggattcactagcttagctcaggttgtagttgactcgctagcagcatggcctctatacctatccctcctacaacttcctgttctgtgtgtaagaagttaagaagtttagaagtttattacaagtacaatgacacttgtaataaatgtcacctgtttacagctttggaggccagactcgctgaattggagacccggctccacacccttgaaaatcccgtagctagccaggaccctgtacagtgcacgcaaaagtagcttagccacctttagctctctcccagcagagtgtcgggagcagctgggaaaacaagatggctgggtgaggaggaagtctaaaccagaagcccctggaacagcactgacacgttcatgtctcttctcttcagcagcttaaaactgagttcttccttcccactttgccaagtgctgcttatagtaggtcttaccttacaataaggaccttaaaacaggaccttaacaaattttatataaataacatttaattgaactgaatttaatcaaccatagaatactttttttggctttaagggatgaactcttagactatttttcttgcatgttatatctttagtttacacatttgtgctttgtgtagggtgtggagcaggatccacatacatgcacagtcagggtgaggctgttgtggaaaatgactaaactgcatagcaacaggcagtttgcttttgcaggaagaacacatctgattggagcagagatgaaacatttgcaagacaccagactgaacgccaaagggagagccaagtctaaactgcggctcctcctcaaccttttaaccaatcacattcatgtcttgtttttatcgtattaaaaaacgttggcacacttttgtccatccagcctgggacagtgcagagggacgtccatggagctgtgagatttcaaccttcaaccgtttaaaacattttgaaaacgtatgtttcaagtttgctcatcttttcccagaaacaaacacgacagtccacaattttaaaattaaaatggaagttattaacaacatgtgggaataaaactggtacagataaacttctggagtggccaggtttttgctggttgtgcctccctcttggctttgcccccgctatgagcaaagaaatgaaaataaaatattcccttgtaaaattataaaacagttaaagtattaatgaactgttgctcagtccctgaaaataataataaaaaataaaagtaatgcattgtttatttctgtttttcttactaacaacaaacaggaaaacatttctgggttcaaaactaaacttaaaaacaagacttacacgttacaacaaaataaaagaaaatatgcaaacagctcacagtaaaacacacagagtgattggacaaaatgaatgcagtaaaacagcctattcccactcagctgctgctaccacgctaaggatttcaacaaaaaactgatgcacacagccagtattgaaaagctgctcattagcactgcagacactcaccagttcaactgtaacaatcacattagtatcggctcacagctacagcagaaaagcagagggctgagataaaagccctgaacgccacaggcctgaaaatcagtcattgcagaaaagcagctaatttggccacatgaaaatccacctttttcacctcctgtcagcagcgcagtg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
  ID: 30
  prot_end: 1938
  additional: 0
  reason: 
  dna_start: 4484218
  target_len: 6353274
  upstream_gap: 
  downstream_gap: 
  target: gi|323152050|gb|GL831151.1| Oreochromis niloticus unplaced genomic scaffold scaffold00019, whole genome shotgun sequence
  strand: +
  status: auto
  prot_len: 1938
  prot_seq: MNDTDMEVFGVAAPYLRKSERERIAAQNVPFDAKSAVFVPHPKQEYVKGKIRSQDGTKVNVEIEDGKVVTVHVDDIRPMNPPKFDKIEDMALLTHLHEPAVLFNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPEVVAGYRGKKRQEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFATITAMGESSKKEQLGSKMQGTLEDQIIQANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTKGKLASADIETYLLEKSRVTFQLLAERSYHIFYQILSNKKPDLIEMLLITSNPYDYPFISQGEITVLSINDAEELMASDRAIDILGFSTEEKVGIYKLTGAVMHNGNMKFKQKQREEQAEPDGTEVADKVAYLMGLNSADLLKALCCPRVKVGNEYVTKGQTPQQVNNAVGALSKAVYEKLFLWMVTRINQQLDTKLPRQHFIGVLDIAGFEIFEINSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDGSFKNKLYDQHLGKNSIFQKPKPSKAKTEAHFSLMHYAGTVDYNISGWLEKNKDPLNDTVVQLYQKASLKLLCQLFATYASADAAADGNKKNYKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKIPGIMDHHLVLHQLRCNGVLEGIRICRKGFPSRILYGDFRQRYRILNASVIPEGQFIDSKKASEKLLSSIDVDHTQYRFGYTKVFFKAGLLGLLEEMRDERLAVLMTRIQAVARGYVTRLRLKEMMKKREAVYIIQYNIRSFMNVKNWPWMKLFFKIKPLLRSAEAEKEMQTMKEEFARLREELAKSEARRKELEEKMVMLMQEKNDLYLQIQAERENLCDAEERCEGLIKSKIHLEAKAKEFSERMEEEEEINAEITAKKRKLEDECSELKRDIDDLELTIAKVEKEKYATENKVKNLIEELTTLEENLLKSSKEMKALQEVHQQTLDDLQAEEDRVNSLIKTKTKLEQQIDDLEGLVEQEKKLRADLERSRRKLEGDLKLNQETIMDLENERQQAEEQLKKKDFEISSLQSKIDDEQALSTQLQKKIKELQARTEELEEEIEAERAARAKVEKQRSDLSRELEEITERLEEAGGASAAQAELNKKREAEIQRLRHELEESTLQHESIAVALRKKQADSVAELGDQIENLQRVKQKLEKEKSEMKMEIDDMARSMETVLKSKANVEKQCRSLEDQMNEYKTKADEAQRSLSDYTTLSARLQTENGELTRLLEEKESILSQVNRGKTAAGHKIEEMKRLLDEEIKTKNALAHSLQSSRHDCELLREQYEEEQEAKAELQRCLSKVNSDVAQWRNKYETDTIQRTEELEEAKKKLVQRLQESEEMTEAANVKCASLEKTKQRLQAEVEDLMVELERSNAANATLDKKQKNFDKVLAEWKQKYEECQSDLEVSQRESRALNTELFKLKNSYEEVLDHLESMKRDNKNLQQEITDINEQVGESTKMLRELEKATKHAEQEKRDTQAALEEAESSLEQEESKILQLELELNQIKSEVERKVAEKDEEIDQLKRNYQRTVDYLQSTLDAETRSRNDAVRMKKKMEGDLNEMEIQLGHANRQAAEATKQLRNLQTQLKDTQVHLDEALQRQEDLKEELAIIERRNNLMMAENEELRASLEQSDRSRKLAEQELMEVSERVQLLHSQNTSLVNSKKKMEADLTQLQSEMEETMQEARNADEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEATVKDLQQRLDEAEQVALKGGKKEIQKLEAKVRELENELEAEQKRSGEAVKGVRKYERKIKELTYQGEEEKKNSARLQDLVNKLQLKVKAYKRQFEEAEEQSSIHLAKFRKVQHELEEAEERADVAESQLNKLRARSRDVAGKGELKS
  score: 1.0
  upstream: 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
  dna_end: 4503537
  matches: 1938
  mismatches: 0
  undetermined: 0